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M3 User Guide documentation
M3 User Guide documentation

Help and Support

  • Help and Support
  • Scheduled Maintenance
  • MASSIVE Terms of Use

Using M3

  • About M3
  • Requesting an account
  • Requesting help on M3
  • Connecting to M3
    • Connecting to M3 via ssh
    • Connecting to M3 via Strudel2
      • Using the Desktop Application in Strudel2
      • Using the JupyterLab Application in Strudel2
      • Using the Terminal Application in Strudel2
      • Using JupyterLab with Custom Minconda Environments in Strudel2
      • Connecting to M3 with Visual Studio Code and Strudel2
    • Troubleshooting Common Issues Using Strudel
  • File Systems on M3
  • Copying files to and from M3
  • Software on M3
    • Installed software modules
    • Common software issues
    • Running Python on M3
    • Running Anaconda on M3
    • Python and conda on M3: Frequently Asked Questions (FAQ)
    • Running Miniconda on M3
    • Using PyCharm with your Virtual environment
    • Running Python Virtual Environments on M3
    • Running Python and conda on M3
    • Conda on M3 (Rocky 9)
    • Software Deprecation: Java
  • Running jobs on M3
    • Partitions on M3
    • Checking the status of M3
    • Slurm Accounts
    • Getting started with job submission scripts
    • Running Simple Batch Jobs
    • MPI on M3
    • On CentOS 7
    • On Rocky 9
    • UCX_NET_DEVICES
    • Running Multi-threading Jobs
    • Running Interactive Jobs
    • Running GPU Jobs
    • Running Array Jobs
    • QoS (Quality of Service)
    • Features & Constraints
    • Checking job status
    • Project Allocation
    • Diagnosing problems with jobs
  • GPUs on M3
    • Starter Guide: GPUs on M3
    • GPU Look-Up Tables
    • Frequently Asked Questions About GPUs on M3

Communities

  • MX2 Eiger
  • Machine Learning
    • How to install and use Pytorch, Tensorflow and CUDA
  • Neuroimaging
  • Cryo EM
    • Cryo EM Benchmarking and Optimisation
      • MotionCor2 Benchmarking - Full graphs
  • Bioinformatics
  • The Genomics partition
  • DGX
  • Data Collections
  • XNAT

FAQs

  • MASSIVE M3 on Rocky Linux 2024
  • Frequently asked questions
  • About Field of Research (FOR) and Socio-Economic Objective (SEO) codes
  • Miscellaneous
  • My HOME directory is full!

Advanced

  • Lustre File System Quickstart Guide

News and events

  • Events
  • Open call to access NCI or DUG through the Monash HPC partnership program.
  • News

Archive

  • Archived pages
    • 5 Jul, 2022: Hardware Refresh Plan
    • January 2024: Updates to Network Switches
    • 12-14 March 2024: Maintenance
    • 16 April 2024: PUTTY SSH vulnerability
    • 13-14 August 2024: Maintenance
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Archived pages#

  • 5 Jul, 2022: Hardware Refresh Plan
  • January 2024: Updates to Network Switches
    • Update: Feb 09 2024
    • Update: Feb 16 2024
  • 12-14 March 2024: Maintenance
  • 16 April 2024: PUTTY SSH vulnerability
  • 13-14 August 2024: Maintenance
Next
5 Jul, 2022: Hardware Refresh Plan
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